RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g38580.1 View Network Show in Genome Browser |
| Other Names | Os01g0566500 |
| Description | beta,beta-carotene 9,10-dioxygenase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21665618-21669309 Nucleotide Length: 1659 |
| Protein-coding | LOC_Os01g38580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g27630 LOC_Os01g27210 LOC_Os01g28450 |
| Downstream Genes | LOC_Os09g15240 LOC_Os08g28410 LOC_Os08g28240 LOC_Os04g46470 LOC_Os03g58080 LOC_Os07g14070 LOC_Os07g14030 LOC_Os07g03730 LOC_Os02g27300 LOC_Os05g01700 LOC_Os01g73530 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g38580.1 |
| Rice Genome Annotation | LOC_Os01g38580.1 |
| Ricechip | LOC_Os01g38580.1 |
| KEGG | osa:4327933 dosa:Os01t0566500-01 |
| Entrez-Gene | 4327933 |