RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g38620.2 View Network Show in Genome Browser |
| Other Names | Os01g0566900 |
| Description | 3-5 exonuclease/ nucleic acid binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21698949-21704210 Nucleotide Length: 924 |
| Protein-coding | LOC_Os01g38620 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15260 |
| Downstream Genes | LOC_Os07g02180 LOC_Os04g03990 LOC_Os10g41440 LOC_Os08g01930 LOC_Os06g23460 LOC_Os03g25970 LOC_Os02g57640 LOC_Os08g10030 LOC_Os07g07310 LOC_Os08g07840 LOC_Os08g22354 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g38620.2 |
| Rice Genome Annotation | LOC_Os01g38620.2 |
| Ricechip | LOC_Os01g38620.2 |
| KEGG | osa:4326337 dosa:Os01t0566900-01 |
| Entrez-Gene | 4326337 |