RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g38950.1 View Network Show in Genome Browser |
| Other Names | Os01g0570500 |
| Description | CK1_CaseinKinase_1.2 - CK1 includes the casein kinase 1 kinases, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21878988-21884037 Nucleotide Length: 1419 |
| Protein-coding | LOC_Os01g38950 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19130 LOC_Os01g08760 LOC_Os01g08770 LOC_Os01g13270 LOC_Os01g32964 LOC_Os01g16930 LOC_Os01g25440 LOC_Os01g37130 |
| Downstream Genes | LOC_Os02g05630 LOC_Os04g56450 LOC_Os06g48300 LOC_Os04g37904 LOC_Os06g33530 LOC_Os06g33549 LOC_Os07g32380 LOC_Os02g55560 LOC_Os02g15594 LOC_Os11g19250 LOC_Os10g39540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g38950.1 |
| Rice Genome Annotation | LOC_Os01g38950.1 |
| Ricechip | LOC_Os01g38950.1 |
| KEGG | osa:4326345 dosa:Os01t0570500-01 |
| Entrez-Gene | 4326345 |