RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39010.1 View Network Show in Genome Browser |
| Other Names | Os01g0571200 |
| Description | 50S ribosomal protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 21933264-21936072 Nucleotide Length: 441 |
| Protein-coding | LOC_Os01g39010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13310 LOC_Os01g12730 |
| Downstream Genes | LOC_Os03g62750 LOC_Os10g37690 LOC_Os03g02480 LOC_Os02g15970 LOC_Os11g47930 LOC_Os08g31460 LOC_Os01g59060 LOC_Os01g72980 LOC_Os05g05950 LOC_Os03g60180 LOC_Os01g53150 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39010.1 |
| Rice Genome Annotation | LOC_Os01g39010.1 |
| Ricechip | LOC_Os01g39010.1 |
| KEGG | osa:4326350 dosa:Os01t0571200-01 |
| Entrez-Gene | 4326350 |