RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39310.1 View Network Show in Genome Browser |
| Other Names | Os01g0575000 |
| Description | SEY1, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22120317-22128727 Nucleotide Length: 2421 |
| Protein-coding | LOC_Os01g39310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g17990 LOC_Os08g22864 LOC_Os08g36440 LOC_Os11g30500 LOC_Os02g40000 LOC_Os04g56160 LOC_Os04g42500 LOC_Os12g44150 LOC_Os07g09340 LOC_Os03g48310 LOC_Os05g25550 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39310.1 |
| Rice Genome Annotation | LOC_Os01g39310.1 |
| Ricechip | LOC_Os01g39310.1 |
| KEGG | osa:4326314 dosa:Os01t0575000-01 |
| Entrez-Gene | 4326314 |