RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39650.1 View Network Show in Genome Browser |
| Other Names | Os01g0578200 |
| Description | programmed cell death protein 2, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22365507-22369394 Nucleotide Length: 1131 |
| Protein-coding | LOC_Os01g39650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01960 |
| Downstream Genes | LOC_Os05g51650 LOC_Os07g29770 LOC_Os10g36250 LOC_Os03g49730 LOC_Os11g19250 LOC_Os03g49210 LOC_Os02g56130 LOC_Os03g58810 LOC_Os06g09570 LOC_Os07g01920 LOC_Os09g18320 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39650.1 |
| Rice Genome Annotation | LOC_Os01g39650.1 |
| Ricechip | LOC_Os01g39650.1 |
| KEGG | dosa:Os01t0578200-00 |
| Entrez-Gene | 4323854 |