RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39810.2 View Network Show in Genome Browser |
| Other Names | Os01g0580100 |
| Description | Alg9-like mannosyltransferase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22450498-22455557 Nucleotide Length: 1662 |
| Protein-coding | LOC_Os01g39810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006629 | lipid metabolic | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11070 |
| Downstream Genes | LOC_Os04g46050 LOC_Os03g51670 LOC_Os03g27970 LOC_Os01g48980 LOC_Os02g35100 LOC_Os03g08300 LOC_Os02g52920 LOC_Os06g36890 LOC_Os06g10760 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39810.2 |
| Rice Genome Annotation | LOC_Os01g39810.2 |
| Ricechip | LOC_Os01g39810.2 |
| KEGG | osa:4324190 dosa:Os01t0580100-01 |
| Entrez-Gene | 4324190 |