RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g39860.1 View Network Show in Genome Browser |
| Other Names | Os01g0580500 |
| Description | 1-aminocyclopropane-1-carboxylate oxidase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22489496-22491483 Nucleotide Length: 939 |
| Protein-coding | LOC_Os01g39860 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g32160 LOC_Os08g32170 LOC_Os05g11810 LOC_Os05g50090 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00270 rn01100 rn01110 |
| Metacyc Pathways | ETHYL-PWY |
| Reference | |
|---|---|
| PubMed | 17012402 21487048 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g39860.1 |
| Rice Genome Annotation | LOC_Os01g39860.1 |
| Ricechip | LOC_Os01g39860.1 |
| KEGG | osa:4324194 dosa:Os01t0580500-01 |
| Entrez-Gene | 4324194 |