RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40000.1 View Network Show in Genome Browser |
| Other Names | Os01g0581900 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22557450-22561727 Nucleotide Length: 969 |
| Protein-coding | LOC_Os01g40000 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g01390 |
| Downstream Genes | LOC_Os10g29514 LOC_Os03g16369 LOC_Os04g54340 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40000.1 |
| Rice Genome Annotation | LOC_Os01g40000.1 |
| Ricechip | LOC_Os01g40000.1 |
| KEGG | osa:9272369 dosa:Os01t0581900-01 |
| Entrez-Gene | 9272369 |