RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40050.1 View Network Show in Genome Browser |
| Other Names | Os01g0582400 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22591350-22596165 Nucleotide Length: 1500 |
| Protein-coding | LOC_Os01g40050 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g02080 |
| Downstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os03g01090 LOC_Os11g34210 LOC_Os08g01750 LOC_Os02g14860 LOC_Os11g38990 LOC_Os03g04960 LOC_Os04g33440 LOC_Os12g04160 LOC_Os11g04370 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40050.1 |
| Rice Genome Annotation | LOC_Os01g40050.1 |
| Ricechip | LOC_Os01g40050.1 |
| KEGG | osa:4324199 dosa:Os01t0582400-01 |
| Entrez-Gene | 4324199 |