RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40094.1 View Network Show in Genome Browser |
| Other Names | Os01g0583100 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22617780-22624147 Nucleotide Length: 1404 |
| Protein-coding | LOC_Os01g40094 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19150 LOC_Os01g38950 LOC_Os01g14860 LOC_Os01g02430 LOC_Os01g02830 LOC_Os01g02800 LOC_Os01g10840 LOC_Os01g02780 LOC_Os01g02410 LOC_Os01g02320 LOC_Os01g02690 More.. |
| Downstream Genes | LOC_Os02g05480 LOC_Os02g17910 LOC_Os05g04340 LOC_Os10g33650 LOC_Os02g03060 LOC_Os01g41730 LOC_Os05g51560 LOC_Os05g11730 LOC_Os03g02680 LOC_Os06g35530 LOC_Os02g14130 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40094.1 |
| Rice Genome Annotation | LOC_Os01g40094.1 |
| Ricechip | LOC_Os01g40094.1 |
| KEGG | osa:4324201 dosa:Os01t0583100-01 |
| Entrez-Gene | 4324201 |