RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40310.1 View Network Show in Genome Browser |
| Other Names | Os01g0585300 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22754488-22755471 Nucleotide Length: 564 |
| Protein-coding | LOC_Os01g40310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g03040 |
| Downstream Genes | LOC_Os08g12840 LOC_Os03g14040 LOC_Os03g18020 LOC_Os02g15750 LOC_Os04g38600 LOC_Os02g51470 LOC_Os02g02390 LOC_Os06g01850 LOC_Os03g48040 LOC_Os02g01340 LOC_Os01g71190 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40310.1 |
| Rice Genome Annotation | LOC_Os01g40310.1 |
| Ricechip | LOC_Os01g40310.1 |
| KEGG | osa:4327654 dosa:Os01t0585300-01 |
| Entrez-Gene | 4327654 |