RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40370.1 View Network Show in Genome Browser |
| Other Names | Os01g0586000 |
| Description | phosphatase-associated family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22791112-22793723 Nucleotide Length: 411 |
| Protein-coding | LOC_Os01g40370 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g40340 |
| Downstream Genes | LOC_Os01g49690 LOC_Os05g51490 LOC_Os06g03940 LOC_Os04g40940 LOC_Os03g55270 LOC_Os02g10020 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40370.1 |
| Rice Genome Annotation | LOC_Os01g40370.1 |
| Ricechip | LOC_Os01g40370.1 |
| KEGG | dosa:Os01t0586000-00 |