RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g40700.1 View Network Show in Genome Browser |
| Other Names | Os01g0589700 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 22999991-23002458 Nucleotide Length: 615 |
| Protein-coding | LOC_Os01g40700 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g05070 LOC_Os01g08310 |
| Downstream Genes | LOC_Os02g49950 LOC_Os12g44340 LOC_Os07g49040 LOC_Os03g19780 LOC_Os03g06510 LOC_Os01g61590 LOC_Os11g04740 LOC_Os08g28730 LOC_Os01g61170 LOC_Os12g29580 LOC_Os07g14540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g40700.1 |
| Rice Genome Annotation | LOC_Os01g40700.1 |
| Ricechip | LOC_Os01g40700.1 |
| KEGG | osa:4324452 dosa:Os01t0589700-01 |
| Entrez-Gene | 4324452 |