RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g41120.1 View Network Show in Genome Browser |
| Other Names | Os01g0594300 |
| Description | retrotransposon protein, putative, Ty3-gypsy subclass, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 23285238-23287337 Nucleotide Length: 1713 |
| Protein-coding | LOC_Os01g41120 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| IEA | ||||
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19220 |
| Downstream Genes | LOC_Os06g19470 LOC_Os05g29870 LOC_Os08g45240 LOC_Os07g09510 LOC_Os10g40590 LOC_Os08g38240 LOC_Os09g23370 LOC_Os02g35070 LOC_Os02g40900 LOC_Os02g58090 LOC_Os09g29980 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5492 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g41120.1 |
| Rice Genome Annotation | LOC_Os01g41120.1 |
| Ricechip | LOC_Os01g41120.1 |
| KEGG | osa:4326385 dosa:Os01t0594300-01 |
| Entrez-Gene | 4326385 |