RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g41610.1 View Network Show in Genome Browser |
| Other Names | Os01g0600000 |
| Description | mitochondrial ATP synthase g subunit family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 23553683-23557654 Nucleotide Length: 369 |
| Protein-coding | LOC_Os01g41610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g39550 LOC_Os02g48610 LOC_Os08g44460 LOC_Os07g39710 LOC_Os01g42650 LOC_Os04g34100 LOC_Os02g33140 LOC_Os02g35610 LOC_Os07g45090 LOC_Os09g36976 LOC_Os08g10608 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2275d |
| Pathways | |
|---|---|
| KEGG Pathways | rn01100 rn00680 rn00190 rn00195 |
| Metacyc Pathways | PWY-6126 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g41610.1 |
| Rice Genome Annotation | LOC_Os01g41610.1 |
| Ricechip | LOC_Os01g41610.1 |
| KEGG | osa:4324593 dosa:Os01t0600000-01 |
| Entrez-Gene | 4324593 |