RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42280.1 View Network Show in Genome Browser |
| Other Names | Os01g0607800 |
| Description | pentatricopeptide, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 23969757-23972311 Nucleotide Length: 1851 |
| Protein-coding | LOC_Os01g42280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os11g43600 LOC_Os03g53710 LOC_Os07g44430 LOC_Os04g48490 LOC_Os02g39740 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5494 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42280.1 |
| Rice Genome Annotation | LOC_Os01g42280.1 |
| Ricechip | LOC_Os01g42280.1 |
| KEGG | osa:4327722 dosa:Os01t0607800-01 |
| Entrez-Gene | 4327722 |