RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42630.3 View Network Show in Genome Browser |
| Other Names | Os01g0612000 |
| Description | C-5 cytosine-specific DNA methylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24247132-24249379 Nucleotide Length: 813 |
| Protein-coding | LOC_Os01g42630 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os03g58400 LOC_Os03g12570 LOC_Os06g15990 LOC_Os03g02010 LOC_Os07g08500 LOC_Os02g49720 LOC_Os01g73310 LOC_Os05g01600 LOC_Os09g08660 LOC_Os03g22190 LOC_Os02g13990 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42630.3 |
| Rice Genome Annotation | LOC_Os01g42630.3 |
| Ricechip | LOC_Os01g42630.3 |
| KEGG | osa:9268926 dosa:Os01t0612000-01 |
| Entrez-Gene | 9268926 |