RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42820.3 View Network Show in Genome Browser |
| Other Names | Os01g0614500 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24369529-24372204 Nucleotide Length: 1344 |
| Protein-coding | LOC_Os01g42820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008219 | cell death | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16190 |
| Downstream Genes | LOC_Os02g15310 LOC_Os01g71200 LOC_Os06g50890 LOC_Os11g45590 LOC_Os05g30980 LOC_Os03g60930 LOC_Os08g29650 LOC_Os03g58720 LOC_Os09g29980 LOC_Os05g01540 LOC_Os03g40310 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42820.3 |
| Rice Genome Annotation | LOC_Os01g42820.3 |
| Ricechip | LOC_Os01g42820.3 |
| KEGG | osa:4326641 dosa:Os01t0614500-01 |
| Entrez-Gene | 4326641 |