RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42850.1 View Network Show in Genome Browser |
| Other Names | Os01g0614900 |
| Description | ThiF family domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24380636-24386687 Nucleotide Length: 3129 |
| Protein-coding | LOC_Os01g42850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34480 LOC_Os01g16540 LOC_Os01g12900 LOC_Os01g12830 LOC_Os01g21320 LOC_Os01g12800 LOC_Os01g12880 LOC_Os01g16146 |
| Downstream Genes | LOC_Os04g01600 LOC_Os06g07630 LOC_Os04g48820 LOC_Os02g26814 LOC_Os07g25420 LOC_Os02g56000 LOC_Os11g01510 LOC_Os07g39780 LOC_Os02g08480 LOC_Os01g74000 LOC_Os01g71300 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | P61-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42850.1 |
| Rice Genome Annotation | LOC_Os01g42850.1 |
| Ricechip | LOC_Os01g42850.1 |
| KEGG | osa:4326644 dosa:Os01t0614900-01 |
| Entrez-Gene | 4326644 |