RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42970.1 View Network Show in Genome Browser |
| Other Names | Os01g0616400 |
| Description | zinc finger C-x8-C-x5-C-x3-H type family protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24471926-24478431 Nucleotide Length: 1389 |
| Protein-coding | LOC_Os01g42970 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09620 |
| Downstream Genes | LOC_Os04g18010 LOC_Os08g06330 LOC_Os06g49080 LOC_Os04g57600 LOC_Os01g61830 LOC_Os01g45730 LOC_Os08g39310 LOC_Os05g46780 LOC_Os05g46770 LOC_Os02g01740 LOC_Os06g01170 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42970.1 |
| Rice Genome Annotation | LOC_Os01g42970.1 |
| Ricechip | LOC_Os01g42970.1 |
| KEGG | osa:4326652 dosa:Os01t0616400-01 |
| Entrez-Gene | 4326652 |