RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g42980.2 View Network Show in Genome Browser |
| Other Names | Os01g0616500 |
| Description | ribosomal protein L22, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24480855-24483664 Nucleotide Length: 510 |
| Protein-coding | LOC_Os01g42980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0005198 | structural molecule activity | Molecular Function | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0005840 | ribosome | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g15290 LOC_Os01g14830 LOC_Os01g10820 LOC_Os01g42640 LOC_Os01g40620 LOC_Os01g04730 |
| Downstream Genes | LOC_Os02g30050 LOC_Os09g19954 LOC_Os07g41750 LOC_Os07g23244 LOC_Os12g38000 LOC_Os11g37510 LOC_Os03g38000 LOC_Os12g30490 LOC_Os04g59494 LOC_Os07g08660 LOC_Os03g58430 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g42980.2 |
| Rice Genome Annotation | LOC_Os01g42980.2 |
| Ricechip | LOC_Os01g42980.2 |
| KEGG | osa:4326653 dosa:Os01t0616500-01 |
| Entrez-Gene | 4326653 |