RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43030.2 View Network Show in Genome Browser |
| Other Names | Os01g0617500 |
| Description | tetratricopeptide repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24537291-24546684 Nucleotide Length: 2169 |
| Protein-coding | LOC_Os01g43030 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g42470 LOC_Os01g32184 LOC_Os01g15490 LOC_Os01g25610 LOC_Os01g16190 LOC_Os01g42430 LOC_Os01g08560 LOC_Os01g18320 LOC_Os01g36930 LOC_Os01g33030 LOC_Os01g07810 More.. |
| Downstream Genes | LOC_Os04g54330 LOC_Os07g10350 LOC_Os03g49230 LOC_Os06g07630 LOC_Os07g13280 LOC_Os08g39080 LOC_Os02g11050 LOC_Os02g10640 LOC_Os05g08360 LOC_Os02g56000 LOC_Os07g29360 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43030.2 |
| Rice Genome Annotation | LOC_Os01g43030.2 |
| Ricechip | LOC_Os01g43030.2 |
| KEGG | osa:4326606 dosa:Os01t0617500-01 |
| Entrez-Gene | 4326606 |