RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43070.2 View Network Show in Genome Browser |
| Other Names | Os01g0617900 |
| Description | psbP-related thylakoid lumenal protein 4, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24572982-24576293 Nucleotide Length: 945 |
| Protein-coding | LOC_Os01g43070 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g33160 LOC_Os01g22520 |
| Downstream Genes | LOC_Os01g71190 LOC_Os07g17390 LOC_Os03g17174 LOC_Os01g43080 LOC_Os01g69950 LOC_Os07g04840 LOC_Os12g37710 LOC_Os04g38750 LOC_Os07g06450 LOC_Os12g02380 LOC_Os11g02450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43070.2 |
| Rice Genome Annotation | LOC_Os01g43070.2 |
| Ricechip | LOC_Os01g43070.2 |
| KEGG | osa:4326610 dosa:Os01t0617900-01 |
| Entrez-Gene | 4326610 |