RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43080.1 View Network Show in Genome Browser |
| Other Names | Os01g0618000,Os01g0617950 |
| Description | exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24575303-24576859 Nucleotide Length: 915 |
| Protein-coding | LOC_Os01g43080 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43070 |
| Downstream Genes | LOC_Os03g02970 LOC_Os08g28980 LOC_Os03g18940 LOC_Os02g26660 LOC_Os12g08740 LOC_Os04g53200 LOC_Os04g23830 LOC_Os06g50050 LOC_Os05g29010 LOC_Os04g47580 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43080.1 |
| Rice Genome Annotation | LOC_Os01g43080.1 |
| Ricechip | LOC_Os01g43080.1 |
| KEGG | osa:4326611 dosa:Os01t0618000-01 |
| Entrez-Gene | 4326611 |