RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43100.1 View Network Show in Genome Browser |
| Other Names | Os01g0618200 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24584654-24589423 Nucleotide Length: 1176 |
| Protein-coding | LOC_Os01g43100 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32660 LOC_Os01g26280 LOC_Os01g02730 LOC_Os01g02430 LOC_Os01g38950 LOC_Os01g42950 LOC_Os01g19150 LOC_Os01g40840 LOC_Os01g41730 LOC_Os01g02830 LOC_Os01g02800 More.. |
| Downstream Genes | LOC_Os03g61690 LOC_Os02g40860 LOC_Os02g08364 LOC_Os05g44940 LOC_Os12g07590 LOC_Os03g21730 LOC_Os06g44210 LOC_Os11g11780 LOC_Os06g22810 LOC_Os01g56330 LOC_Os02g56560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43100.1 |
| Rice Genome Annotation | LOC_Os01g43100.1 |
| Ricechip | LOC_Os01g43100.1 |
| KEGG | osa:9269413 dosa:Os01t0618200-01 |
| Entrez-Gene | 9269413 |