RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43390.2 View Network Show in Genome Browser |
| Other Names | Os01g0622300 |
| Description | uroporphyrinogen decarboxylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24823997-24828139 Nucleotide Length: 1017 |
| Protein-coding | LOC_Os01g43390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g18320 LOC_Os01g08510 LOC_Os01g31610 |
| Downstream Genes | LOC_Os04g41260 LOC_Os02g11050 LOC_Os10g41150 LOC_Os01g53450 LOC_Os05g01970 LOC_Os02g07230 LOC_Os01g52770 LOC_Os06g04910 LOC_Os03g57149 LOC_Os03g21550 LOC_Os05g41900 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1846a-5p osa-miR1846b-5p osa-miR1846c-5p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43390.2 |
| Rice Genome Annotation | LOC_Os01g43390.2 |
| Ricechip | LOC_Os01g43390.2 |
| KEGG | osa:4326635 dosa:Os01t0622300-01 |
| Entrez-Gene | 4326635 |