RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43410.1 View Network Show in Genome Browser |
| Other Names | Os01g0622600 |
| Description | CAMK_CAMK_like.9 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24839124-24843618 Nucleotide Length: 1557 |
| Protein-coding | LOC_Os01g43410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g39770 LOC_Os01g11250 LOC_Os01g09200 LOC_Os01g38950 LOC_Os01g16240 LOC_Os01g23590 LOC_Os01g17190 LOC_Os01g14950 LOC_Os01g07520 LOC_Os01g24060 LOC_Os01g25440 More.. |
| Downstream Genes | LOC_Os01g51010 LOC_Os05g48030 LOC_Os02g35010 LOC_Os10g23090 LOC_Os05g26890 LOC_Os02g14840 LOC_Os01g55200 LOC_Os01g48680 LOC_Os06g06090 LOC_Os05g43570 LOC_Os03g17700 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2095-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43410.1 |
| Rice Genome Annotation | LOC_Os01g43410.1 |
| Ricechip | LOC_Os01g43410.1 |
| KEGG | osa:4326638 dosa:Os01t0622600-01 |
| Entrez-Gene | 4326638 |