RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43480.1 View Network Show in Genome Browser |
| Other Names | Os01g0623500 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24894538-24900026 Nucleotide Length: 2439 |
| Protein-coding | LOC_Os01g43480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os06g49140 LOC_Os05g49230 LOC_Os03g60750 LOC_Os09g27270 LOC_Os07g42632 LOC_Os10g36860 LOC_Os07g09720 LOC_Os10g28640 LOC_Os04g34130 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00860 rn01100 rn01110 |
| Metacyc Pathways | CHLOROPHYLL-SYN |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43480.1 |
| Rice Genome Annotation | LOC_Os01g43480.1 |
| Ricechip | LOC_Os01g43480.1 |
| KEGG | osa:4326678 dosa:Os01t0623500-01 |
| Entrez-Gene | 4326678 |