RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g43540.1 View Network Show in Genome Browser
Other Names	Os01g0624500
Description	suppressor of G2 allele of SKP1, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 24937665-24942905 Nucleotide Length: 1104
Protein-coding	LOC_Os01g43540

Gene Ontology Classification
GO	Name	Type	Code
GO:0009056	catabolic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009790	embryo development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0019538	protein metabolic process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0007165	signal transduction	Biological Process	IEA
GO:0005515	protein binding	Molecular Function	IEA
GO:0005737	cytoplasm	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0005622	intracellular	Cellular Component	IEA
GO:0005634	nucleus	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g27160 LOC_Os01g27150 LOC_Os01g04330 LOC_Os01g31870
Downstream Genes	LOC_Os01g55270 LOC_Os01g47770 LOC_Os08g27070 LOC_Os03g45270 LOC_Os11g26910 LOC_Os06g12530 LOC_Os03g57210 LOC_Os02g58030 LOC_Os09g36830 LOC_Os02g01920 LOC_Os07g05810 More..

Reference
PubMed	18257679

Database Links
Gramene	LOC_Os01g43540.1
Rice Genome Annotation	LOC_Os01g43540.1
Ricechip	LOC_Os01g43540.1
KEGG	osa:4326682 dosa:Os01t0624500-01
Entrez-Gene	4326682