RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43580.1 View Network Show in Genome Browser |
| Other Names | Os01g0625200 |
| Description | kinesin motor domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 24958511-24962850 Nucleotide Length: 2124 |
| Protein-coding | LOC_Os01g43580 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003774 | motor activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13370 LOC_Os01g04730 |
| Downstream Genes | LOC_Os05g41750 LOC_Os05g38820 LOC_Os09g02650 LOC_Os05g14860 LOC_Os03g04410 LOC_Os02g19140 LOC_Os01g54080 LOC_Os03g24040 LOC_Os07g46560 LOC_Os02g03620 LOC_Os05g49780 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2105 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43580.1 |
| Rice Genome Annotation | LOC_Os01g43580.1 |
| Ricechip | LOC_Os01g43580.1 |
| KEGG | osa:4326684 dosa:Os01t0625200-01 |
| Entrez-Gene | 4326684 |