RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g43680.1 View Network Show in Genome Browser |
| Other Names | Os01g0626900 |
| Description | CPuORF29 - conserved peptide uORF-containing transcript, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 25029794-25033246 Nucleotide Length: 738 |
| Protein-coding | LOC_Os01g43680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09620 |
| Downstream Genes | LOC_Os02g12480 LOC_Os03g17660 LOC_Os03g41080 LOC_Os02g20970 LOC_Os03g31490 LOC_Os09g35730 LOC_Os02g28720 LOC_Os04g51690 LOC_Os05g10670 LOC_Os06g35770 LOC_Os07g06660 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g43680.1 |
| Rice Genome Annotation | LOC_Os01g43680.1 |
| Ricechip | LOC_Os01g43680.1 |
| KEGG | osa:4326692 dosa:Os01t0626900-01 |
| Entrez-Gene | 4326692 |