RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g44980.1 View Network Show in Genome Browser |
| Other Names | Os01g0636600 |
| Description | peptide deformylase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 25519992-25523268 Nucleotide Length: 486 |
| Protein-coding | LOC_Os01g44980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006412 | translation | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04460 LOC_Os01g12290 LOC_Os01g12400 LOC_Os01g12410 LOC_Os01g04570 LOC_Os01g02700 LOC_Os01g20900 LOC_Os01g02830 LOC_Os01g02800 LOC_Os01g26280 |
| Downstream Genes | LOC_Os01g49330 LOC_Os09g30100 LOC_Os08g37780 LOC_Os02g21510 LOC_Os12g09290 LOC_Os03g62750 LOC_Os09g29630 LOC_Os05g19954 LOC_Os07g44060 LOC_Os01g74152 LOC_Os11g35274 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g44980.1 |
| Rice Genome Annotation | LOC_Os01g44980.1 |
| Ricechip | LOC_Os01g44980.1 |
| KEGG | osa:9269695 dosa:Os01t0636600-01 |
| Entrez-Gene | 9269695 |