RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g45274.3 View Network Show in Genome Browser |
| Other Names | Os01g0639900 |
| Description | carbonic anhydrase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 25696613-25705090 Nucleotide Length: 789 |
| Protein-coding | LOC_Os01g45274 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g04730 LOC_Os01g17170 LOC_Os01g05650 |
| Downstream Genes | LOC_Os02g49870 LOC_Os03g03720 LOC_Os04g16680 LOC_Os03g55720 LOC_Os07g47640 LOC_Os07g28610 LOC_Os07g37030 LOC_Os12g05430 LOC_Os07g37240 LOC_Os08g02630 LOC_Os05g49300 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g45274.3 |
| Rice Genome Annotation | LOC_Os01g45274.3 |
| Ricechip | LOC_Os01g45274.3 |
| KEGG | osa:4326583 dosa:Os01t0639900-01 |
| Entrez-Gene | 4326583 |