RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g45550.1 View Network Show in Genome Browser |
| Other Names | Os01g0643300 |
| Description | auxin efflux carrier component, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 25863702-25868361 Nucleotide Length: 2013 |
| Protein-coding | LOC_Os01g45550 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os06g41060 LOC_Os08g09190 LOC_Os01g60230 LOC_Os08g44840 LOC_Os04g58840 LOC_Os11g08750 LOC_Os11g44810 LOC_Os01g61610 LOC_Os03g03320 LOC_Os03g60460 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Reference | |
|---|---|
| PubMed | 22882529 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g45550.1 |
| Rice Genome Annotation | LOC_Os01g45550.1 |
| Ricechip | LOC_Os01g45550.1 |
| KEGG | osa:4326565 dosa:Os01t0643300-01 |
| Entrez-Gene | 4326565 |