RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g46020.1 View Network Show in Genome Browser |
| Other Names | Os01g0648500 |
| Description | TATA-binding protein-associated factor TAFII55 family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 26163786-26166472 Nucleotide Length: 531 |
| Protein-coding | LOC_Os01g46020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g32750 LOC_Os01g23630 LOC_Os01g34614 LOC_Os01g39020 LOC_Os01g43590 |
| Downstream Genes | LOC_Os01g63940 LOC_Os06g44030 LOC_Os03g29470 LOC_Os09g26180 LOC_Os10g28340 LOC_Os01g54550 LOC_Os06g43790 LOC_Os03g45410 LOC_Os05g48030 LOC_Os12g39070 LOC_Os01g48810 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g46020.1 |
| Rice Genome Annotation | LOC_Os01g46020.1 |
| Ricechip | LOC_Os01g46020.1 |
| KEGG | osa:4326246 dosa:Os01t0648500-01 |
| Entrez-Gene | 4326246 |