RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g46932.1 View Network Show in Genome Browser |
| Other Names | Os01g0658500 |
| Description | vacuolar protein-sorting-associated protein 25, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 26785187-26788665 Nucleotide Length: 540 |
| Protein-coding | LOC_Os01g46932 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g11300 LOC_Os01g11340 LOC_Os01g11270 LOC_Os01g11280 LOC_Os01g04260 LOC_Os01g01120 LOC_Os01g43030 LOC_Os01g42470 |
| Downstream Genes | LOC_Os02g38300 LOC_Os01g57260 LOC_Os09g36020 LOC_Os08g25010 LOC_Os11g44790 LOC_Os11g29370 LOC_Os03g30460 LOC_Os02g37000 LOC_Os11g43640 LOC_Os12g01390 LOC_Os11g01380 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g46932.1 |
| Rice Genome Annotation | LOC_Os01g46932.1 |
| Ricechip | LOC_Os01g46932.1 |
| KEGG | osa:4327163 dosa:Os01t0658500-02 |
| Entrez-Gene | 4327163 |