RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g47410.2 View Network Show in Genome Browser |
| Other Names | Os01g0663400 |
| Description | aspartic proteinase oryzasin-1 precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27085745-27092240 Nucleotide Length: 1569 |
| Protein-coding | LOC_Os01g47410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g09460 LOC_Os01g44130 LOC_Os01g18670 |
| Downstream Genes | LOC_Os02g47970 LOC_Os03g48930 LOC_Os12g40780 LOC_Os08g04280 LOC_Os03g59020 LOC_Os05g09500 LOC_Os06g06030 LOC_Os11g18170 LOC_Os02g44500 LOC_Os07g09890 LOC_Os05g45590 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g47410.2 |
| Rice Genome Annotation | LOC_Os01g47410.2 |
| Ricechip | LOC_Os01g47410.2 |
| KEGG | osa:4327861 dosa:Os01t0663400-01 |
| Entrez-Gene | 4327861 |