RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g47530.2 View Network Show in Genome Browser |
| Other Names | Os01g0665200 |
| Description | CGMC_MAPKCMGC_2.6 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27171287-27178431 Nucleotide Length: 1743 |
| Protein-coding | LOC_Os01g47530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19130 LOC_Os01g40094 LOC_Os01g43100 LOC_Os01g32964 LOC_Os01g13060 LOC_Os01g15480 LOC_Os01g40050 |
| Downstream Genes | LOC_Os06g33549 LOC_Os04g56450 LOC_Os04g37904 LOC_Os02g05630 LOC_Os06g48300 LOC_Os02g15594 LOC_Os06g33530 LOC_Os02g55560 LOC_Os07g32380 LOC_Os10g39540 LOC_Os02g35910 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR159a.1 osa-miR159b |
| Reference | |
|---|---|
| PubMed | 16673940 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g47530.2 |
| Rice Genome Annotation | LOC_Os01g47530.2 |
| Ricechip | LOC_Os01g47530.2 |
| KEGG | osa:4326853 dosa:Os01t0665200-01 |
| Entrez-Gene | 4326853 |