RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g47650.1 View Network Show in Genome Browser |
| Other Names | Os01g0666800 |
| Description | vacuolar protein sorting-associated protein 16, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27257381-27266486 Nucleotide Length: 2655 |
| Protein-coding | LOC_Os01g47650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g12730 LOC_Os01g37980 LOC_Os01g04840 |
| Downstream Genes | LOC_Os04g31390 LOC_Os04g14654 LOC_Os08g08060 LOC_Os04g11880 LOC_Os05g44050 LOC_Os08g17600 LOC_Os02g02720 LOC_Os01g51120 LOC_Os02g24134 LOC_Os02g06490 LOC_Os05g46000 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g47650.1 |
| Rice Genome Annotation | LOC_Os01g47650.1 |
| Ricechip | LOC_Os01g47650.1 |
| KEGG | osa:4326864 dosa:Os01t0666800-01 |
| Entrez-Gene | 4326864 |