RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g47780.1 View Network Show in Genome Browser |
| Other Names | Os01g0668100 |
| Description | fasciclin domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27340899-27341950 Nucleotide Length: 744 |
| Protein-coding | LOC_Os01g47780 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16030 LOC_Os01g46290 LOC_Os01g25540 LOC_Os01g14140 LOC_Os01g11010 LOC_Os01g06580 LOC_Os01g11710 LOC_Os01g04720 |
| Downstream Genes | LOC_Os05g04820 LOC_Os11g26190 LOC_Os05g32110 LOC_Os09g39410 LOC_Os03g02240 LOC_Os02g52500 LOC_Os04g33990 LOC_Os04g40730 LOC_Os01g50010 LOC_Os12g07160 LOC_Os12g01560 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g47780.1 |
| Rice Genome Annotation | LOC_Os01g47780.1 |
| Ricechip | LOC_Os01g47780.1 |
| KEGG | osa:4326326 dosa:Os01t0668100-01 |
| Entrez-Gene | 4326326 |