RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g47800.1 View Network Show in Genome Browser |
| Other Names | Os01g0668300 |
| Description | AAA-type ATPase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27357337-27363861 Nucleotide Length: 2760 |
| Protein-coding | LOC_Os01g47800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g21940 |
| Downstream Genes | LOC_Os03g02720 LOC_Os02g33490 LOC_Os01g65420 LOC_Os06g04722 LOC_Os06g04710 LOC_Os06g04690 LOC_Os03g42050 LOC_Os04g18010 LOC_Os11g45590 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g47800.1 |
| Rice Genome Annotation | LOC_Os01g47800.1 |
| Ricechip | LOC_Os01g47800.1 |
| KEGG | osa:4326327 dosa:Os01t0668300-01 |
| Entrez-Gene | 4326327 |