RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48170.1 View Network Show in Genome Browser |
| Other Names | Os01g0672201 |
| Description | homeobox domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27582148-27583129 Nucleotide Length: 735 |
| Protein-coding | LOC_Os01g48170 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g10840 LOC_Os01g45990 LOC_Os01g11250 LOC_Os01g18050 LOC_Os01g14860 |
| Downstream Genes | LOC_Os09g35910 LOC_Os04g45010 LOC_Os03g15940 LOC_Os02g17970 LOC_Os02g42820 LOC_Os04g45810 LOC_Os02g43330 LOC_Os10g35930 LOC_Os07g39320 LOC_Os03g10210 LOC_Os09g31970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48170.1 |
| Rice Genome Annotation | LOC_Os01g48170.1 |
| Ricechip | LOC_Os01g48170.1 |
| KEGG | dosa:Os01t0672201-00 |