RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48180.1 View Network Show in Genome Browser |
| Other Names | Os01g0672300 |
| Description | DDT domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27587377-27598835 Nucleotide Length: 4815 |
| Protein-coding | LOC_Os01g48180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os09g31970 LOC_Os10g33420 LOC_Os08g40180 LOC_Os11g13810 LOC_Os08g01940 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g06640 LOC_Os06g06090 LOC_Os03g17700 LOC_Os12g37390 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48180.1 |
| Rice Genome Annotation | LOC_Os01g48180.1 |
| Ricechip | LOC_Os01g48180.1 |
| KEGG | osa:4325898 dosa:Os01t0672300-01 |
| Entrez-Gene | 4325898 |