RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48200.1 View Network Show in Genome Browser |
| Other Names | Os01g0672500 |
| Description | callose synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27605913-27608676 Nucleotide Length: 1410 |
| Protein-coding | LOC_Os01g48200 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0000003 | reproduction | Biological Process | IEA | |
| GO:0009607 | response to biotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g34890 |
| Downstream Genes | LOC_Os06g08380 LOC_Os01g55040 LOC_Os07g08330 LOC_Os11g04070 LOC_Os12g03880 LOC_Os08g03640 LOC_Os08g33488 LOC_Os02g52340 LOC_Os03g03610 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48200.1 |
| Rice Genome Annotation | LOC_Os01g48200.1 |
| Ricechip | LOC_Os01g48200.1 |
| KEGG | osa:4325900 dosa:Os01t0672500-01 |
| Entrez-Gene | 4325900 |