RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48390.1 View Network Show in Genome Browser |
| Other Names | Os01g0674800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 27733409-27739844 Nucleotide Length: 1944 |
| Protein-coding | LOC_Os01g48390 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0030154 | cell differentiation | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g19130 LOC_Os01g40094 LOC_Os01g25440 |
| Downstream Genes | LOC_Os06g48300 LOC_Os02g55560 LOC_Os02g05630 LOC_Os04g56450 LOC_Os06g33549 LOC_Os04g37904 LOC_Os02g15594 LOC_Os07g32380 LOC_Os10g39540 LOC_Os06g33530 LOC_Os02g35910 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR2097-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48390.1 |
| Rice Genome Annotation | LOC_Os01g48390.1 |
| Ricechip | LOC_Os01g48390.1 |
| KEGG | osa:4325509 dosa:Os01t0674800-01 |
| Entrez-Gene | 4325509 |