RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48850.1 View Network Show in Genome Browser |
| Other Names | Os01g0680900 |
| Description | auxin-responsive protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28028738-28032031 Nucleotide Length: 1119 |
| Protein-coding | LOC_Os01g48850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Downstream Genes | LOC_Os08g41290 LOC_Os08g29520 LOC_Os03g50820 LOC_Os02g42890 LOC_Os04g45090 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5825 osa-miR1439 |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48850.1 |
| Rice Genome Annotation | LOC_Os01g48850.1 |
| Ricechip | LOC_Os01g48850.1 |
| KEGG | osa:4324390 dosa:Os01t0680900-01 |
| Entrez-Gene | 4324390 |