RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os01g48960.1 View Network Show in Genome Browser
Other Names	Os01g0682001,Os01g0681900
Description	glutamate synthase, chloroplast precursor, putative, expressed
Gene Attributes	Chromosome: Chr1 CDS Coordinates (5'-3'): 28091208-28102930 Nucleotide Length: 6504
Protein-coding	LOC_Os01g48960

Gene Ontology Classification
GO	Name	Type	Code
GO:0008150	biological_process	Biological Process	IEA
GO:0008150	biological_process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009058	biosynthetic process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0040007	growth	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0009536	plastid	Cellular Component	IEA
GO:0009536	plastid	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os01g37760 LOC_Os01g45760 LOC_Os01g18320 LOC_Os01g22520 LOC_Os01g42234 LOC_Os01g04730 LOC_Os01g27050 LOC_Os01g18050 LOC_Os01g08560 LOC_Os01g25610 LOC_Os01g10820 More..
Downstream Genes	LOC_Os05g48200 LOC_Os12g03720 LOC_Os04g53210 LOC_Os06g15420 LOC_Os11g03900 LOC_Os02g17700 LOC_Os06g22140 LOC_Os01g65260 LOC_Os07g05820 LOC_Os03g57220 LOC_Os03g12290 More..

Pathways
KEGG Pathways	rn00250 rn01110 rn01100 rn01120 rn00910 rn01210
Metacyc Pathways	PWY-3282 GLUGLNSYN-PWY

Database Links
Gramene	LOC_Os01g48960.1
Rice Genome Annotation	LOC_Os01g48960.1
Ricechip	LOC_Os01g48960.1
KEGG	osa:4324398 dosa:Os01t0682001-01
Entrez-Gene	4330949