RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g48980.1 View Network Show in Genome Browser |
| Other Names | Os01g0682200 |
| Description | GPI transamidase component family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28118055-28123308 Nucleotide Length: 1761 |
| Protein-coding | LOC_Os01g48980 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13190 LOC_Os01g11070 LOC_Os01g39810 LOC_Os01g19840 |
| Downstream Genes | LOC_Os02g12740 LOC_Os11g28980 LOC_Os02g46350 LOC_Os01g67960 LOC_Os10g08940 LOC_Os01g64990 LOC_Os10g34750 LOC_Os02g02110 LOC_Os03g08300 LOC_Os05g28750 LOC_Os03g11440 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g48980.1 |
| Rice Genome Annotation | LOC_Os01g48980.1 |
| Ricechip | LOC_Os01g48980.1 |
| KEGG | osa:4324399 dosa:Os01t0682200-00 |
| Entrez-Gene | 4324399 |