RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os01g49010.1 View Network Show in Genome Browser |
| Other Names | Os01g0683400 |
| Description | ORC4 - Putative origin recognition complex subunit 4, expressed |
| Gene Attributes | Chromosome: Chr1 CDS Coordinates (5'-3'): 28161732-28166115 Nucleotide Length: 1413 |
| Protein-coding | LOC_Os01g49010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g36390 LOC_Os01g05900 LOC_Os01g05630 LOC_Os01g05610 LOC_Os01g06010 LOC_Os01g05970 LOC_Os01g47600 LOC_Os01g24690 LOC_Os01g27730 |
| Downstream Genes | LOC_Os03g08640 LOC_Os10g26280 LOC_Os03g55200 LOC_Os05g39850 LOC_Os07g43540 LOC_Os01g63710 LOC_Os06g08790 LOC_Os09g17850 LOC_Os03g43890 LOC_Os11g29380 LOC_Os12g37400 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os01g49010.1 |
| Rice Genome Annotation | LOC_Os01g49010.1 |
| Ricechip | LOC_Os01g49010.1 |
| KEGG | osa:4324139 dosa:Os01t0683400-01 |
| Entrez-Gene | 4324139 |